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Add dome-ml-osai-ui website project
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‎.gitignore‎

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**/node_modules/
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**/dist/
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**/.angular/

‎dome-ml-osai-ui/.editorconfig‎

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# Editor configuration, see https://editorconfig.org
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root = true
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[*]
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charset = utf-8
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indent_style = space
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indent_size = 2
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insert_final_newline = true
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trim_trailing_whitespace = true
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[*.md]
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max_line_length = off
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trim_trailing_whitespace = false

‎dome-ml-osai-ui/.gitignore‎

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# compiled output
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/dist
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/tmp
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/out-tsc
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# Only exists if Bazel was run
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/bazel-out
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# dependencies
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/node_modules
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# profiling files
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chrome-profiler-events*.json
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speed-measure-plugin*.json
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# IDEs and editors
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/.idea
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.project
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.classpath
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.c9/
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*.launch
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.settings/
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*.sublime-workspace
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# IDE - VSCode
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.vscode/*
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!.vscode/settings.json
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!.vscode/tasks.json
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!.vscode/launch.json
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!.vscode/extensions.json
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.history/*
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# misc
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/.sass-cache
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/connect.lock
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/coverage
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/libpeerconnection.log
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npm-debug.log
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yarn-error.log
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testem.log
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/typings
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# System Files
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.DS_Store
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Thumbs.db

‎dome-ml-osai-ui/.nvmrc‎

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lts/fermium

‎dome-ml-osai-ui/README.md‎

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# DOME-ML (UI) - OSAI
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## Install node
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Install node and modules. Don't use `npm install` since it will upgrade and break packages.
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```bash
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nvm use
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npm ci
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```
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## Development server
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Run `ng serve` for a dev server (or run `npm run start`). Navigate to `http://localhost:4200/`. The app will automatically reload if you change any of the source files.
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## Build
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Run `ng build` to build the project. The build artifacts will be stored in the `dist/` directory.
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Use the `--prod` flag for a production build (or run `npm run build-prod`).
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## Deploy to production
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Build the app for production and rsync `dist/` to `persefone`:
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```bash
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npm run deploy-prod-quick
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```
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## Update YAML
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Run in python: scripts/update_yaml.py
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This will pull the latest YAML for OSAI registry table from GitHub: https://github.com/BioComputingUP/OSAI_ecosystem/blob/main/data/ecosystem_components_list.yml

‎dome-ml-osai-ui/angular.json‎

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{
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"$schema": "node_modules/@angular/cli/lib/config/schema.json",
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"version": 1,
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"newProjectRoot": "projects",
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"projects": {
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"template-ui": {
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"projectType": "application",
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"schematics": {},
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"root": "",
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"sourceRoot": "src",
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"prefix": "app",
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"architect": {
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"build": {
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"builder": "@angular-devkit/build-angular:browser",
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"options": {
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"outputPath": "dist",
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"index": "src/index.html",
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"main": "src/main.ts",
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"polyfills": "src/polyfills.ts",
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"tsConfig": "tsconfig.app.json",
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"aot": true,
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"assets": [
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"src/favicon.ico",
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"src/assets"
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],
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"styles": [
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"node_modules/ngx-bootstrap/datepicker/bs-datepicker.css",
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"node_modules/bootstrap/dist/css/bootstrap.css",
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"src/styles.scss"
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],
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"scripts": []
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},
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"configurations": {
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"production": {
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"fileReplacements": [
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{
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"replace": "src/environments/environment.ts",
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"with": "src/environments/environment.prod.ts"
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}
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],
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"optimization": true,
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"outputHashing": "all",
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"sourceMap": false,
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"extractCss": true,
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"namedChunks": false,
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"extractLicenses": true,
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"vendorChunk": false,
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"buildOptimizer": true,
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"budgets": [
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{
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"type": "initial",
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"maximumWarning": "10mb",
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"maximumError": "20mb"
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},
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{
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"type": "anyComponentStyle",
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"maximumWarning": "6kb",
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"maximumError": "200kb"
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}
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]
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}
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}
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},
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"serve": {
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"builder": "@angular-devkit/build-angular:dev-server",
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"options": {
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"browserTarget": "template-ui:build"
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},
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"configurations": {
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"production": {
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"browserTarget": "template-ui:build:production"
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}
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}
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},
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"extract-i18n": {
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"builder": "@angular-devkit/build-angular:extract-i18n",
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"options": {
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"browserTarget": "template-ui:build"
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}
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},
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"test": {
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"builder": "@angular-devkit/build-angular:karma",
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"options": {
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"main": "src/test.ts",
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"polyfills": "src/polyfills.ts",
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"tsConfig": "tsconfig.spec.json",
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"karmaConfig": "karma.conf.js",
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"assets": [
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"src/favicon.ico",
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"src/assets"
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],
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"styles": [
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"node_modules/bootstrap/dist/css/bootstrap.css",
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"node_modules/ngx-bootstrap/datepicker/bs-datepicker.css",
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"src/styles.scss"
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],
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"scripts": []
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}
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},
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"lint": {
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"builder": "@angular-devkit/build-angular:tslint",
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"options": {
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"tsConfig": [
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"tsconfig.app.json",
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"tsconfig.spec.json",
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"e2e/tsconfig.json"
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],
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"exclude": [
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"**/node_modules/**"
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]
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}
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},
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"e2e": {
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"builder": "@angular-devkit/build-angular:protractor",
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"options": {
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"protractorConfig": "e2e/protractor.conf.js",
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"devServerTarget": "template-ui:serve"
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},
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"configurations": {
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"production": {
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"devServerTarget": "template-ui:serve:production"
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}
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}
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}
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}
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}
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},
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"defaultProject": "template-ui",
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"schematics": {
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"@schematics/angular:component": {
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"style": "scss"
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}
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},
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"cli": {
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"analytics": false
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}
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}

‎dome-ml-osai-ui/browserslist‎

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# This file is used by the build system to adjust CSS and JS output to support the specified browsers below.
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# For additional information regarding the format and rule options, please see:
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# https://github.com/browserslist/browserslist#queries
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# You can see what browsers were selected by your queries by running:
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# npx browserslist
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> 0.5%
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last 2 versions
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Firefox ESR
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not dead
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not IE 9-11 # For IE 9-11 support, remove 'not'.

‎dome-ml-osai-ui/e2e/protractor.conf.js‎

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// @ts-check
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// Protractor configuration file, see link for more information
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// https://github.com/angular/protractor/blob/master/lib/config.ts
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const { SpecReporter } = require('jasmine-spec-reporter');
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/**
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* @type { import("protractor").Config }
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*/
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exports.config = {
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allScriptsTimeout: 11000,
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specs: [
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'./src/**/*.e2e-spec.ts'
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],
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capabilities: {
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browserName: 'chrome'
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},
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directConnect: true,
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baseUrl: 'http://localhost:4200/',
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framework: 'jasmine',
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jasmineNodeOpts: {
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showColors: true,
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defaultTimeoutInterval: 30000,
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print: function() {}
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},
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onPrepare() {
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require('ts-node').register({
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project: require('path').join(__dirname, './tsconfig.json')
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});
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jasmine.getEnv().addReporter(new SpecReporter({ spec: { displayStacktrace: true } }));
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}
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};

‎dome-ml-osai-ui/e2e/src/app.e2e-spec.ts‎

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import { AppPage } from './app.po';
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import { browser, logging } from 'protractor';
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describe('workspace-project App', () => {
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let page: AppPage;
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beforeEach(() => {
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page = new AppPage();
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});
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it('should display welcome message', () => {
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page.navigateTo();
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expect(page.getTitleText()).toEqual('template-ui app is running!');
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});
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afterEach(async () => {
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// Assert that there are no errors emitted from the browser
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const logs = await browser.manage().logs().get(logging.Type.BROWSER);
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expect(logs).not.toContain(jasmine.objectContaining({
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level: logging.Level.SEVERE,
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} as logging.Entry));
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});
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});

‎dome-ml-osai-ui/e2e/src/app.po.ts‎

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import { browser, by, element } from 'protractor';
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export class AppPage {
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navigateTo(): Promise<unknown> {
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return browser.get(browser.baseUrl) as Promise<unknown>;
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}
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getTitleText(): Promise<string> {
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return element(by.css('app-root .content span')).getText() as Promise<string>;
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}
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}

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